PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62000213-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24828.9 Da PI: 8.8626 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.7 | 2.1e-16 | 105 | 155 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y GVr+++ +gr+++eIrdps k r++lg++ ta eAa+a+++a+ ++g+ AUR62000213-RA 105 YIGVRRRP-WGRFASEIRDPSR--KGYRIWLGTYNTAIEAARAYDRAAFDIRGH 155 88******.**********854..34***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVVVVVSSVD LGQGLILVVD LIGGVVVDSG RPFSGVHGGG RPVFGGARVR VRVSRHCLDD 60 TRLQYIYSSL DEEGIDYDET FRAFCIEPRK VGHKEDRRHN NSGNYIGVRR RPWGRFASEI 120 RDPSRKGYRI WLGTYNTAIE AARAYDRAAF DIRGHKARLN FPHEVECWSS STKRTIDQVQ 180 RLGEKRQRID NGERELENNY CSYDDDDQLI FKLPKLI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 6e-19 | ERF family protein |