PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000181-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 502aa MW: 56436.2 Da PI: 6.4506

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000181-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.9	4e-19	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++ql++Le+++++++yp++++++eLA+++gLte+q++ WF+ rR k+k+ AUR62000181-RA 20 KKRRFKTPYQLQALEDFYNEHKYPTESMKAELAENIGLTEKQISGWFCHRRLKDKR 75 8999**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MEDSNEVQCE ENKALPEKNK KRRFKTPYQL QALEDFYNEH KYPTESMKAE LAENIGLTEK 60 QISGWFCHRR LKDKRIINGE LNPPGRQELS SGVIQDRGSG LKQDSCSSTK QGDYRLADLR 120 EVESRRFGNN DFPAAEINYE QRVLDDGIEM DDTSSESNSA LQGSFYPHKR SSLEVETTEY 180 RVPNGLIAQN KRRVGPSGYL KIKGQTENAA VTAVKRQLGR QYQEDGPPLG IEFDPLPPGA 240 FESPSKNANS DAYGVSVPVG SSSLDIGAIH KRPSLSTIRN QDKFVAPADY RSLHKTDSDS 300 FSYRQPKQKS TYPNQGRVLP AHKSSCVASY SARESSDYDG SMNNSILRKH GPSGMGSDGG 360 KFTSEPEEPW WNDYDNGNSV AVRTRERLDS RSAAAPVRNK DPIDKEDRVP PSRIMKGWQD 420 EEFYAERRPI VDHHDSIRSK MSPNELRAIK RGREELRQEG YVAIKPSSQE PPQWSRQIRG 480 PIEMPSSFSE DETAETSSSM D*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MEDSNEVQCE ENKALPEKNK KRRFKTPYQL QALEDFYNEH KYPTESMKAE LAENIGLTEK  60
QISGWFCHRR LKDKRIINGE LNPPGRQELS SGVIQDRGSG LKQDSCSSTK QGDYRLADLR  120
EVESRRFGNN DFPAAEINYE QRVLDDGIEM DDTSSESNSA LQGSFYPHKR SSLEVETTEY  180
RVPNGLIAQN KRRVGPSGYL KIKGQTENAA VTAVKRQLGR QYQEDGPPLG IEFDPLPPGA  240
FESPSKNANS DAYGVSVPVG SSSLDIGAIH KRPSLSTIRN QDKFVAPADY RSLHKTDSDS  300
FSYRQPKQKS TYPNQGRVLP AHKSSCVASY SARESSDYDG SMNNSILRKH GPSGMGSDGG  360
KFTSEPEEPW WNDYDNGNSV AVRTRERLDS RSAAAPVRNK DPIDKEDRVP PSRIMKGWQD  420
EEFYAERRPI VDHHDSIRSK MSPNELRAIK RGREELRQEG YVAIKPSSQE PPQWSRQIRG  480
PIEMPSSFSE DETAETSSSM D*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	25	KKRRFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-77	HB-other family protein