PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553337.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 501aa MW: 55325.2 Da PI: 7.0079

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.2	1.3e-31	156	213	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k XP_023553337.1 156 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIVYKGTHDHPK 213 8**************************************.*************85 PP
2	WRKY	105.5	2.8e-33	327	385	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023553337.1 327 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 385 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MLLSVEPSPT TGSFTKLPMA HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM 60 VPADMSHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSNRSTQMDP VASGAAVPDI 120 DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK 180 CTHPNCEVKK LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SASASVKDGP DKPSPLTGQD 240 DRSCSIYTRT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDNDI ILKRRKMELG 300 GFEACPMVRP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV 360 RKHVERASHD PKAVITTYEG KHNHDVPTAK TSSHDAAGPL RTAPLRYRLE DRDTVSLDLG 420 VGIGENRSNE YRQQALAPNG NFNFEVVQEN SAPTYFSVHN RGMNQHGPRE SLSESRSVDV 480 VPLNHSSHPY PPSVGRILTG P

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MLLSVEPSPT TGSFTKLPMA HDSSSSAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM  60
VPADMSHRKD EQSCELQVQG QPQPFTAPPM TKSEINVISN DSNRSTQMDP VASGAAVPDI  120
DGDDFNHSLN TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKHVK GSEFPRSYYK  180
CTHPNCEVKK LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SASASVKDGP DKPSPLTGQD  240
DRSCSIYTRT VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDNDI ILKRRKMELG  300
GFEACPMVRP IREPRVVVQT LSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTNVGCPV  360
RKHVERASHD PKAVITTYEG KHNHDVPTAK TSSHDAAGPL RTAPLRYRLE DRDTVSLDLG  420
VGIGENRSNE YRQQALAPNG NFNFEVVQEN SAPTYFSVHN RGMNQHGPRE SLSESRSVDV  480
VPLNHSSHPY PPSVGRILTG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-153	WRKY family protein