PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553052.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 211aa    MW: 23789.7 Da    PI: 5.8108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-1952102155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ kl+g
  XP_023553052.1  52 PVYRGVRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAMKLRG 102
                     68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MESFSTFYED YFSSSESSTC RRSIFSDKEL MLAASNPKKR AGRKKFKETR HPVYRGVRRR  60
NSGKWVCEVR EPNKKSRIWL GTFPTAEMAA RAHDVAAMKL RGRSACLNFA DSAWRLPEPA  120
SADARDIQKA AAEAAEAFRP AESDGSSVDD SRTENMMTAE TTPENVLYVD DDAIFGLPGL  180
LEDMAAGMML PPPQHFRDDM DFYSDVSLWS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-68ERF family protein