PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552949.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 272aa    MW: 29183.9 Da    PI: 7.9396
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.4e-18136186255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae Aa a+++a+ +++g
  XP_023552949.1 136 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEYAALAYDRAAYRMRG 186
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MMYGQSNGCE SDFVLLETIR RHLLGDSEPY RCGNFAVAGA AAPGLCGSSN FSSLYPCLTE  60
NWGELPLKVD DSEDMFLAGV LHDAVRLGWD PLLGSSPSEA FNFGFSDVKT EPLILSPAVV  120
PAKVEVAAVV PAKGKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EYAALAYDRA  180
AYRMRGSKAL LNFPLRVNSG EPDPVRVTSK RSSSRSSPEP TSSSSSVESG SPKRRKKVVA  240
ATQAALESIQ LVVGTNATQV EADVAKSTNG EQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232238PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-58ERF family protein