PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552880.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 343aa    MW: 37483.9 Da    PI: 5.1959
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-29222280259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D + WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp ++++tY+ eHnh 
  XP_023552880.1 222 SDSWGWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSLSDPGAFVVTYTAEHNHA 280
                     79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEDWDLQAIV KGCNGSITPS RTATLMEDPN LVSFLIEKDE ILSSCSVYDE FEGLFGSSDD  60
SASASASASA AAISGLLREL KEPEKLHRKS QIAATKQKQS QPPMEDWDLQ AIVKGCNGSI  120
TPSRTATLME DPNLVSFLIE KDEILSSCSV YDEFEGLFGS SDDSASASAS ASAAAISGLL  180
RELKEPEKLH RKSHIAATKQ KQSKKSRQNR VVKEVKAEGV CSDSWGWRKY GQKPIKGSPY  240
PRSYYRCSSS KGCSARKQVE RSLSDPGAFV VTYTAEHNHA EPTRRNALAG TTRKKFPAPE  300
NTSLDRSVAS VEEEQPMEGV AEGGVIMDLP FEFFSGLEDF LFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-31WRKY family protein