PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552452.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 334aa    MW: 35876.7 Da    PI: 7.1609
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-1399143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_023552452.1  99 PWTEEEHRMFLMGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS GSGALQGGSN  60
NPASPGETPD HGVAADGYAS EDFVPGSSSS CRERKKGVPW TEEEHRMFLM GLQKLGKGDW  120
RGIARNYVVS RTPTQVASHA QKYFIRQTNV SRRKRRSSLF DIVAGEHVEN SIVQQDFLSV  180
NNSHAESQSN NPLPTPPTVD EECESMDSTN SNDGEPAPAE PEDPQCCYPV VYPAYVTPFF  240
PFSIPFYSGY SAEPAIKETH EVLKPTAVHS KSPLNVDELV GMSKLSLGES IGHAGPSSLS  300
LKLLEGSSRR SAFHANPASG SENMSSGGSP IPAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-127MYB_related family protein