PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 648aa MW: 74270.3 Da PI: 7.9198 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.8 | 2.5e-08 | 590 | 635 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ + XP_023552226.1 590 DWSAIQERALVQALKTFPKEtsqRWERVAAAIP-GKTVNQCKKKFTS 635 699999***************************.*********9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 648 aa Download sequence |
MTVQANLRLL TYSQEIIDGQ PIYVSSNSLP VKALNYEPAG HAFHDVVLKL LGYEDNEVSD 60 DNEQTAEDAE RKYAPSFDSY SSKGKKKSGG STQQDHYALL GLSHLRYLAT EEQIRKSYRE 120 TALKYHPDKQ AALLLAEETE AAKQAKKDEI ESHFKSIQEA YEVLIDPVKR RIYDSTDEFD 180 DEIPTDCAVQ DFFTVFGPAF MRNGRWSVNQ SVPSLGDDKT PLKEVDDFYN FWYTFKSWRE 240 FPHADEFDLE QAESRDHKRW MERQNAKLTE KARKEENARI RTLVDNAYKR DPRIQRRKEE 300 EKAEKQRKKE AKILAKKLQE EEAIRLAEEE KQRKEEEEKR AAQVAQHQKK VKEKEKKLLR 360 KERSRLRTLS GPVISQSLLD LSEENVENLC SSLDIEQLRN ICDKMEGKTG MELAKVLWDA 420 QESSHSDRKH QECNKTAQQN GSTTANVTLP LSSNLQKKER PWSKDEIELL RKGMLKYPKG 480 TSRRWEVISD YIGTQRSVEE ILKATKTILL QKPDSAKAFD SFLEKRKPAQ AIASPLSTRE 540 ELVGVSSKKP EDNVAINGNL DVPSVGQNVN NQTPSDSSAN GIPSTSEQDD WSAIQERALV 600 QALKTFPKET SQRWERVAAA IPGKTVNQCK KKFTSMKESF RNKKNASA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |