PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552113.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bZIP

Protein Properties

Length: 400aa MW: 42687 Da PI: 6.7343

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.3	2.6e-21	294	356	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+kr+rrkq+NRe+ArrsR+RK+ae++eL+ ++++L++eN +L++e+++++ e+++l se+ XP_023552113.1 294 EREIKRQRRKQSNRESARRSRLRKQAECDELAHRAEALQEENASLRSEVNRIRSEYEQLLSEN 356 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MSGSEMEKPP KDKETKTPPP TTQEQTSTTS ASAVNPDWSG FQAYSPIPPH GFLASSPQAH 60 PYMWGVQHIM PPYGTPPHPY VAMYPPGGIY AHPSIPPGSY PFSPFAMPSP NGITEASGNT 120 AGSLEGDVKL PEVKEKLPIK RSKGSLGSLN MITGKNNELG KTSANGAYSK SAESASEGSS 180 EGSDANSQNE SQPKLGSRQD TSEVEASQNG NSMHGTQNGG SNTQAMAAIP LATSGAPGIG 240 PGPPTNLNIG MDYWGAPSTI PAMRGKVQSA PVAGGLVTTG SRDGIQSQLW LQDEREIKRQ 300 RRKQSNRESA RRSRLRKQAE CDELAHRAEA LQEENASLRS EVNRIRSEYE QLLSENASLK 360 ERLGEVPGNE ELRTSRNGQH SSNETTQLTE SAVVQVGNKN

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MSGSEMEKPP KDKETKTPPP TTQEQTSTTS ASAVNPDWSG FQAYSPIPPH GFLASSPQAH  60
PYMWGVQHIM PPYGTPPHPY VAMYPPGGIY AHPSIPPGSY PFSPFAMPSP NGITEASGNT  120
AGSLEGDVKL PEVKEKLPIK RSKGSLGSLN MITGKNNELG KTSANGAYSK SAESASEGSS  180
EGSDANSQNE SQPKLGSRQD TSEVEASQNG NSMHGTQNGG SNTQAMAAIP LATSGAPGIG  240
PGPPTNLNIG MDYWGAPSTI PAMRGKVQSA PVAGGLVTTG SRDGIQSQLW LQDEREIKRQ  300
RRKQSNRESA RRSRLRKQAE CDELAHRAEA LQEENASLRS EVNRIRSEYE QLLSENASLK  360
ERLGEVPGNE ELRTSRNGQH SSNETTQLTE SAVVQVGNKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	317	RRSRLRK
2	311	318	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-151	bZIP family protein