PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023551382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 277aa MW: 31772.1 Da PI: 4.3424 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.1 | 8.3e-20 | 64 | 117 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le Fe ++++ e+++eLAkklgL+ rqV vWFqNrRa++k XP_023551382.1 64 KKRRLTQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWK 117 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.5 | 6.5e-42 | 63 | 155 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl++eqv+lLE sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+ ++ + + ke+e+L++e+++ XP_023551382.1 63 EKKRRLTQEQVHLLEISFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFCSSYDFMAKENERLKAEVAS 155 69*************************************************************************************999865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MMSDGLIFNR SPGHANMLFF GSGDSILRGS CFTKGMEENS KRPFFSSPDD LFDDDYYDDQ 60 PPEKKRRLTQ EQVHLLEISF EAENKLEPER KTELAKKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDLLKS SYDSFCSSYD FMAKENERLK AEVASLTEKL QAKEVVESSF QAKKSEPILE 180 DQLLVSVEQH NMKIDDHHSC RSNGSAVLDE DGPQLLDSGD SYLLSSDYDG CVLPVFGVNS 240 EEEDVSDDGQ GYFSDVYTAA DQQTHEAEPL TWWDWSL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 120 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-62 | HD-ZIP family protein |