PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551312.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 545aa MW: 61205 Da PI: 4.4124

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	1e-49	10	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLk k+ g+kl+l ++i+e+d+yk+eP++Lp +k+k+++++w+fFs+r+++y++ +r +rat++gyWkatgkd+ + + XP_023551312.1 10 PPGFRFHPTDEELVLYYLKFKICGRKLKL-DIIRETDVYKWEPEELPgqSKLKSGDRQWFFFSPREHRYPNASRLSRATRHGYWKATGKDRIIQC 103 8**************************.99**********964489999**********************************99 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy grap+ge+tdWvmhey+l XP_023551312.1 104 -NSRNVGVKKTLVFYLGRAPNGERTDWVMHEYSL 136 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MGLCDEGDWP PGFRFHPTDE ELVLYYLKFK ICGRKLKLDI IRETDVYKWE PEELPGQSKL 60 KSGDRQWFFF SPREHRYPNA SRLSRATRHG YWKATGKDRI IQCNSRNVGV KKTLVFYLGR 120 APNGERTDWV MHEYSLEEDE LKRCKNVKDY YALYKLYKKS GPGPKNGEQY GAPFKEEDWV 180 DDADGQEPQV KILDEVNSVV REIENGRIQL SSDDIEELMQ QVVNDPVPVL PSISGYHQFD 240 SAVQVDDKEE TVSTMIDAYS WDHVLPEADK VHDFSGHPSD LHASFDFTQL GNSQLQSFES 300 EISSAPKYCE EEDFLEINDL LDPEPSPVAN VSPTELDGLS ELDLFHDANM FLRDLGPIVP 360 ETALDPYLNA LDIDVTNTLN DRLDYGMDNG FWKNNETENA FSFPESHGQF VTQSTLGVGY 420 ESVSSAAAGT AGTTTENQTA TNAGGDSASW FSSNLWAFVE SIPTTPASAS ENVNRAFERM 480 SSFSRLKLNT LNTLNANVAV DNPVTGARRT GMNKGFLLFS IVGVLCAILW VLIGNVRLWG 540 NCIAS

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MGLCDEGDWP PGFRFHPTDE ELVLYYLKFK ICGRKLKLDI IRETDVYKWE PEELPGQSKL  60
KSGDRQWFFF SPREHRYPNA SRLSRATRHG YWKATGKDRI IQCNSRNVGV KKTLVFYLGR  120
APNGERTDWV MHEYSLEEDE LKRCKNVKDY YALYKLYKKS GPGPKNGEQY GAPFKEEDWV  180
DDADGQEPQV KILDEVNSVV REIENGRIQL SSDDIEELMQ QVVNDPVPVL PSISGYHQFD  240
SAVQVDDKEE TVSTMIDAYS WDHVLPEADK VHDFSGHPSD LHASFDFTQL GNSQLQSFES  300
EISSAPKYCE EEDFLEINDL LDPEPSPVAN VSPTELDGLS ELDLFHDANM FLRDLGPIVP  360
ETALDPYLNA LDIDVTNTLN DRLDYGMDNG FWKNNETENA FSFPESHGQF VTQSTLGVGY  420
ESVSSAAAGT AGTTTENQTA TNAGGDSASW FSSNLWAFVE SIPTTPASAS ENVNRAFERM  480
SSFSRLKLNT LNTLNANVAV DNPVTGARRT GMNKGFLLFS IVGVLCAILW VLIGNVRLWG  540
NCIAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-118	NAC family protein