PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551273.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 342aa    MW: 37978.9 Da    PI: 4.8761
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.63.3e-30178236259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers+ dp+ ++itY+geH h+
  XP_023551273.1 178 TDMWAWRKYGQKPIKGSPYPRNYYRCSSSkGCGARKQVERSNADPESFIITYTGEHIHP 236
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MAAGNNDWDL SAVVRSCNSA AYRTTPTATA ATETDLSCLA SLTFDDDPND VAFSFPDILQ  60
PQQQEQQQHN GFDELHQAIC FLPNSLTAAV TIAPEIPTAT TNRYFQEEFT PILPQPDPVE  120
AAETAAALQN QHHHQIQPSF PPEFPNSSMV QSNIPKSRKR KNQQKRTVCH VTADNLSTDM  180
WAWRKYGQKP IKGSPYPRNY YRCSSSKGCG ARKQVERSNA DPESFIITYT GEHIHPRPTH  240
RNCLAGSSRN RPLSSVTNKN PTGDPNQSLI TTALVGSGSS PADSPMTPFN DDYGGGDEKE  300
GEMFEDMAID SDDDYDDILI PNLMVRDEIF AGFDEIRRRR PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.11e-56WRKY family protein