PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551191.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 574aa MW: 63985 Da PI: 6.1226

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.2	1.4e-08	303	340	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ L++++gL+ +qV++WF N R + XP_023551191.1 303 FEHflHPYPSDVDKHILSRQTGLSRSQVSNWFINARVR 340 554459******************************88 PP
2	BELL	109.1	2.7e-35	165	235	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++elqk+k+kL slleeV++rY++y+eq+++v++sFeavag g+a++Y +lA+ka+S+hFr+Lkd i++qi XP_023551191.1 165 FMELQKRKTKLFSLLEEVERRYRHYCEQMKAVVASFEAVAGNGAARVYSALASKAMSKHFRSLKDGIVGQI 235 689******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MAGEDKSNEM VVGGFYYNSN QIQPGFGSST EPAEMFNLQV NNESGGGGDD EFHHHLMVVG 60 PWGTAAAADS SLRCVFPCEA NERPSHGLSL SLSSTNPSSI GLQSFELRTQ QSSLAIFQLR 120 NSKFLAPTQE LLYEFCSLEI TNDMNNRHQN QAISSTNSSL QSLDFMELQK RKTKLFSLLE 180 EVERRYRHYC EQMKAVVASF EAVAGNGAAR VYSALASKAM SKHFRSLKDG IVGQIQATKK 240 AMGEKDPIAP GTTRGETPRL RVIDQALRQQ RAFHQISVME SHPWRPQRGL PERSVSVLRA 300 WLFEHFLHPY PSDVDKHILS RQTGLSRSQV SNWFINARVR LWKPMVEEMY LEETKEQVEE 360 IDNTNFNNMN NNGNNSFDGM MDFDDEIDGQ RSIPTGVEDR KPTSDQLLRI DSEGLSSIIS 420 NNSEKNDSRA MKAMQNHQGQ HVHNNHNHTF GRIATDAFGM VELDFSSYNH DSCGVSSYLN 480 NNNQHFNNGS SSSVSLTLGL QQHAAGGKNV SEGVSIAFSP VTSAATATQS SIFFTRDHIE 540 ECQPVQYSLL DGETTQNLPY RNLMGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MAGEDKSNEM VVGGFYYNSN QIQPGFGSST EPAEMFNLQV NNESGGGGDD EFHHHLMVVG  60
PWGTAAAADS SLRCVFPCEA NERPSHGLSL SLSSTNPSSI GLQSFELRTQ QSSLAIFQLR  120
NSKFLAPTQE LLYEFCSLEI TNDMNNRHQN QAISSTNSSL QSLDFMELQK RKTKLFSLLE  180
EVERRYRHYC EQMKAVVASF EAVAGNGAAR VYSALASKAM SKHFRSLKDG IVGQIQATKK  240
AMGEKDPIAP GTTRGETPRL RVIDQALRQQ RAFHQISVME SHPWRPQRGL PERSVSVLRA  300
WLFEHFLHPY PSDVDKHILS RQTGLSRSQV SNWFINARVR LWKPMVEEMY LEETKEQVEE  360
IDNTNFNNMN NNGNNSFDGM MDFDDEIDGQ RSIPTGVEDR KPTSDQLLRI DSEGLSSIIS  420
NNSEKNDSRA MKAMQNHQGQ HVHNNHNHTF GRIATDAFGM VELDFSSYNH DSCGVSSYLN  480
NNNQHFNNGS SSSVSLTLGL QQHAAGGKNV SEGVSIAFSP VTSAATATQS SIFFTRDHIE  540
ECQPVQYSLL DGETTQNLPY RNLMGAQLLH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-131	TALE family protein