PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023550256.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 537aa MW: 60211.1 Da PI: 4.5046

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023550256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.6e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk++++ + i+ ++iyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_023550256.1 9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPISVTEIYKSEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579************************9.89***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_023550256.1 103 C-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKSE PWDLPGKSKL 60 KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRCNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE 180 EDEELTLPGE EIVANKGLVD DSEALHLEVD DIAQQYFDGE LPCECTQLPS NCPQDASNHV 240 MLPNVLVEND NKPETCAIET VELQQSHKFF QPEQYQMGAN SEKDEDIDYL LNEPYPSVPD 300 DLALNEELFL EANDLSNPAE SDPTGFDLLE EYLTFFDADD NLHLDFEPSD ILGSEEPISG 360 QAIPEEVEKE FMATKQASVA SVNDASTSKP NLEAIETDSK SPFLKRASYM LGNIPAPPAF 420 ASEYPSKDMA IRLNSSAHTS SPAHVTAQMI RVRNSTPSGN LSSSLYGKNA DVELILSFAR 480 HRHQGESDDI VTQLPIFGAQ SQKNGNMGSR AFLFFFLLFW VLILSVSFKV GSYIYTH

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKSE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRCNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE  180
EDEELTLPGE EIVANKGLVD DSEALHLEVD DIAQQYFDGE LPCECTQLPS NCPQDASNHV  240
MLPNVLVEND NKPETCAIET VELQQSHKFF QPEQYQMGAN SEKDEDIDYL LNEPYPSVPD  300
DLALNEELFL EANDLSNPAE SDPTGFDLLE EYLTFFDADD NLHLDFEPSD ILGSEEPISG  360
QAIPEEVEKE FMATKQASVA SVNDASTSKP NLEAIETDSK SPFLKRASYM LGNIPAPPAF  420
ASEYPSKDMA IRLNSSAHTS SPAHVTAQMI RVRNSTPSGN LSSSLYGKNA DVELILSFAR  480
HRHQGESDDI VTQLPIFGAQ SQKNGNMGSR AFLFFFLLFW VLILSVSFKV GSYIYTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-101	NAC family protein