PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549596.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 82aa    MW: 9875.32 Da    PI: 10.3494
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-083069445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l+ + +k+ G + W++Ia +++ gR ++++  +w 
   XP_023549596.1 30 MTAQEEDLIHRMHKLIGDR-WDLIAGRIP-GRKPEEIERYWI 69
                     69***************99.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MNNHRQQKHA KLPPLESEEV SSTRWQFITM TAQEEDLIHR MHKLIGDRWD LIAGRIPGRK  60
PEEIERYWIM THLEGFGKRR RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-34MYB_related family protein