PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549393.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 293aa MW: 33627.6 Da PI: 7.9378

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.2	1.4e-32	131	188	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts C+vkk+ver +dp++v++tYeg+H+h+ XP_023549393.1 131 EDGYRWRKYGQKAVKNSPYPRSYYRCTSVACNVKKRVERYLKDPSIVVTTYEGQHTHS 188 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MEEVAAADSL RFPLPENQSC LKFMELIAVD QEFSSQFDVF SLSSLSSSLF TNPVENLEIG 60 NQWPTTPNYS SSSEIVNDEV IEPKLEREEK QHSRQTLKTD KQLKTKKMTR KKKDQEPRFA 120 FMTKSEVDHL EDGYRWRKYG QKAVKNSPYP RSYYRCTSVA CNVKKRVERY LKDPSIVVTT 180 YEGQHTHSSP NMTRSTFFPP PISTALYNGS TMFTTATTTP SLFHYQNGHN SNFINHPKGF 240 VASSFHPPCD VAPSNHANQF FSPTINHRLL QDIAPFQYDE LAWRDCSISQ NPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	2e-44	WRKY family protein