PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549360.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 282aa    MW: 30724.5 Da    PI: 7.0857
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-18205239135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023549360.1 205 CLHCGAEKTPQWRAGPYGPKTLCNACGVRYKSGRL 239
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MESSLAFMDD LLDFSSDIGG EDEEDDAVPP FSLKPKAATT AAAALTDSSE FNAGFHPEDS  60
SSCRVLPEED YAEEELEWLS NEDVFPAVET FVDILSDHHP QPPSLMSVSK QNSPVSVLET  120
TSISSHGGNK PSAHGSILMS CCDGLKVPGK ARSKRRRGRH VSGHHLWFKQ QPSSRNVKQI  180
QPITTATATT AAAVTTAKTA IGRKCLHCGA EKTPQWRAGP YGPKTLCNAC GVRYKSGRLV  240
PEYRPASSPT FSPELHSNSH RKVMEMRRQK QFGMVVNPMD KG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.15e-55GATA family protein