PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023549128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 163aa MW: 17625.8 Da PI: 10.0833 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00019 | 37 | 59 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ++F ++ L H++ H XP_023549128.1 37 FRCQFCRRVFANSQALGGHQNAH 59 89******************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 163 aa Download sequence |
MSILKLFGFP LVEHDGVQPE TPEGGGGDIN SDHDRKFRCQ FCRRVFANSQ ALGGHQNAHK 60 RERQRAKRAL YFHALRPPPL YTNIGSSGGS RILPPSRNGY FTAAYGGVSA SSGRWMFGKM 120 ESSGCKLDGE KGLPNHNCAM NSSAFASIIS SPPSMVFSSL SSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58070.1 | 2e-14 | C2H2 family protein |