PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548782.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 328aa    MW: 36112.1 Da    PI: 6.7274
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17223257135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023548782.1 223 CLHCQSEKTPQWRTGPMGPKTLCNACGVRYKSGRL 257
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEVNKFMVGG YFDAGVGQFS PEKTKATEHF AIDDLFDFSN EDAIMMDGFF DNVAGTSTES  60
STVTAVDSCN SSVSGGDHQH FHGNIGSRSF DESQFSGDLC VPCDDLAELE WLSNFVEDSF  120
STEGKDLQAL NYLTNSHSIS KPQTPETSSS SELPPSDSSK NTPRFPAETP LPSKARSKRS  180
RTAPCDWTTR LLHLLSPTDR KPPKSSSSKK KDAPNGDSSS RKCLHCQSEK TPQWRTGPMG  240
PKTLCNACGV RYKSGRLVPE YRPAASPTFI SAKHSNSHRK VLELRRQKEL QMAQQQQQQF  300
INQSSIFGVT NGCDEYLISH HMGPVIGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-66GATA family protein