PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 642aa MW: 72542.6 Da PI: 6.0322 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.3 | 2e-06 | 456 | 489 | 17 | 55 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N++f L+++lP++ +K++iL +++Y+k+L+ XP_023548777.1 456 NEKFMALKSMLPSL-----NEINKVSILNDTIKYLKMLE 489 99***********8.....58***************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 642 aa Download sequence |
MACEPGFLRK QLAVAVKSIQ WSYAIFWSPS IRQHGVLEWC DGYYNGDIKT RKTVQAEDVH 60 VDIMGLHRSE QLRELYKSLL DGENEQRSKK PPASLSPEDL SDAEWYYLVC MSFFFNQGQG 120 LPGRALADDR TIWLCNAQYA ESSVFSRSLL AKSASIQTVV CFPYLGGVIE LGVTEQVSED 180 PSLLQHVKDF LLKFSKPICS KKSSSSAYKD DNGKEPMVAK SDNEIVEVLA MENVHGLTAA 240 KFDRKAVNGI QRKNDEFGID SLDRFSNGCE RFHQMVDPLR LEGVEGGASC FRSLQFLDDD 300 FSYGFQDSMN PSDCISEALV NNPEKVSSKG TNDLSLKELQ NSNRTKSVSL DPRTDEDLHY 360 KRTIFTILGS STQLAGSPLL HSFSSRSSFM PWKKGMAEIN TAPVQQKMLK KILFTVPLLS 420 AGCSLNRLND GERSILKQGN DDFCTKDVVH DKLRENEKFM ALKSMLPSLN EINKVSILND 480 TIKYLKMLEA RVQELETCMD SLYYEERFRR KYLDMVEQTS DNYDYDKIEG TLKPSTNKRK 540 ACEMDETDLK LKNNIPKDGL KLDVKVTMNE QEVLVDMHCP YREYILVDVM DTLNDLQLDA 600 HSVQSSDRNG VFSLTLKSKF RGMVAASVGM VKLALLKVAN KS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41315.1 | 1e-146 | bHLH family protein |