PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547862.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bZIP

Protein Properties

Length: 437aa MW: 47924.2 Da PI: 6.159

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46	1.1e-14	245	298	4	57
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr+ +NRe+ArrsR+RK+a + eLe+ v +L e ++L k+l +++++ XP_023547862.1 245 ARRARRMLSNRESARRSRRRKQAHLNELETQVGQLRVEHSTLLKRLTDVNQKYD 298 689****************************************99999988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MHTLFSSEDL SESFWSPQPP SSPPSYSPFR SLDPSLTMNR SASEWALERF LEEVSAFPVN 60 SCPSTTSDRV VVSPVDVASP ASQSSTSKRD EGDDEVLEIK KADCDHDRSQ PIPSLDPSKM 120 ARSNPDQYRV FLKNRLDMAC AAAALSRVAS SEPKGPVQPA DHPGQTSNAF EFGIQAPGQG 180 SDRGTSTKES EPTGSQLGIP SLPAMPKKLG IQAVQTTSGS SRDESDDDDL EGDIENIENM 240 DPGDARRARR MLSNRESARR SRRRKQAHLN ELETQVGQLR VEHSTLLKRL TDVNQKYDDA 300 AVDNRILKAD IETLRAKVKM AEETVKRVTG VNPLLAAMSQ SQMPFVSSQM PTQSNAQFFH 360 RNMSPFANSP PHHQNLEGPV PTISPPIPHV GRSQNDVATK MTDMPSVHID HVQKQTVHGP 420 MSGWDAEPSH AAPNHKN

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MHTLFSSEDL SESFWSPQPP SSPPSYSPFR SLDPSLTMNR SASEWALERF LEEVSAFPVN  60
SCPSTTSDRV VVSPVDVASP ASQSSTSKRD EGDDEVLEIK KADCDHDRSQ PIPSLDPSKM  120
ARSNPDQYRV FLKNRLDMAC AAAALSRVAS SEPKGPVQPA DHPGQTSNAF EFGIQAPGQG  180
SDRGTSTKES EPTGSQLGIP SLPAMPKKLG IQAVQTTSGS SRDESDDDDL EGDIENIENM  240
DPGDARRARR MLSNRESARR SRRRKQAHLN ELETQVGQLR VEHSTLLKRL TDVNQKYDDA  300
AVDNRILKAD IETLRAKVKM AEETVKRVTG VNPLLAAMSQ SQMPFVSSQM PTQSNAQFFH  360
RNMSPFANSP PHHQNLEGPV PTISPPIPHV GRSQNDVATK MTDMPSVHID HVQKQTVHGP  420
MSGWDAEPSH AAPNHKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	266	RRSRRRKQ
2	261	266	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54620.1	4e-41	bZIP family protein