PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547678.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 270aa    MW: 30663.3 Da    PI: 6.8806
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-16231265133
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ k
  XP_023547678.1 231 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANK 265
                     *****99999**********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDGIHASDGR MHMNHAQHSM HTQSVQEQEH HDFHYTSNGN TLADEHENEG HGIMVVEREA  60
PSDHGDLPEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDTVS PEKVQAVLLL LGGREVPIRV  120
PSIPITNQQN DRHLTDEAFN QALANIPPRL SVPQRLASLI RFREKRKERN FDKKIRYTVR  180
KEVALRMQRN KGQFTSSKPT HEDSSLAITS WESNENWATD GNGSQQQEIL CRHCGISEKS  240
TPMMRRGPDG PRTLCNACGL MWANKVLFCW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-111GATA family protein