PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GATA | ||||||||
Protein Properties | Length: 303aa MW: 33956.6 Da PI: 6.7512 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.6 | 3e-17 | 231 | 267 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgpdg++tLCnaCGl+++ kg+ XP_023547675.1 231 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 267 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MDGIHASDGR MHMNHAQHSM HTQSVQEQEH HDFHYTSNGN TLADEHENEG HGIMVVEREA 60 PSDHGDLPEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDTVS PEKVQAVLLL LGGREVPIRV 120 PSIPITNQQN DRHLTDEAFN QALANIPPRL SVPQRLASLI RFREKRKERN FDKKIRYTVR 180 KEVALRMQRN KGQFTSSKPT HEDSSLAITS WESNENWATD GNGSQQQEIL CRHCGISEKS 240 TPMMRRGPDG PRTLCNACGL MWANKGTLRD LSKAPNQGGQ ASTFNRNENV VQDGDSESNP 300 KGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.1 | 1e-119 | GATA family protein |