PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547674.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 303aa    MW: 33956.6 Da    PI: 6.7512
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.63e-17231267135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_023547674.1 231 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 267
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDGIHASDGR MHMNHAQHSM HTQSVQEQEH HDFHYTSNGN TLADEHENEG HGIMVVEREA  60
PSDHGDLPEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDTVS PEKVQAVLLL LGGREVPIRV  120
PSIPITNQQN DRHLTDEAFN QALANIPPRL SVPQRLASLI RFREKRKERN FDKKIRYTVR  180
KEVALRMQRN KGQFTSSKPT HEDSSLAITS WESNENWATD GNGSQQQEIL CRHCGISEKS  240
TPMMRRGPDG PRTLCNACGL MWANKGTLRD LSKAPNQGGQ ASTFNRNENV VQDGDSESNP  300
KGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-119GATA family protein