PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547073.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 356aa MW: 39712.7 Da PI: 6.4358

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.7	2.7e-29	132	192	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++ g+++prsYYrCt++ +C++ k+v+rs+edp+v+eitY+g+H+++ XP_023547073.1 132 EDGYSWRKYGQKDILGATYPRSYYRCTFRntqNCWAVKQVQRSDEDPSVFEITYRGKHTCS 192 8************************998889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MEGGRSWDQT SLVGEIIQGM ELTKRLRTEL SSASTEESRG SLIQGILSSY ERALLILKRN 60 APMNQPPMPE VAPGLPGSPI SVNGSASSDD SGRGLKDPQQ DPRKESKKRK TQPRWKVQVK 120 VNSETGFEGP HEDGYSWRKY GQKDILGATY PRSYYRCTFR NTQNCWAVKQ VQRSDEDPSV 180 FEITYRGKHT CSQGNYLAQS CHSPEKQENK ENDHGHDHHQ KQPAQESLFG NQTIENIEKL 240 ENKALTFCFG STSGGCKDIV NGGFSHLAID THTALGSFSQ SFISPTTPDS NYFTPSPCQR 300 SNIGGTHNMQ PLESDVHEIF SANTSATNSP ILDWDFPFDS EQINSNFPFN SPGFFY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MEGGRSWDQT SLVGEIIQGM ELTKRLRTEL SSASTEESRG SLIQGILSSY ERALLILKRN  60
APMNQPPMPE VAPGLPGSPI SVNGSASSDD SGRGLKDPQQ DPRKESKKRK TQPRWKVQVK  120
VNSETGFEGP HEDGYSWRKY GQKDILGATY PRSYYRCTFR NTQNCWAVKQ VQRSDEDPSV  180
FEITYRGKHT CSQGNYLAQS CHSPEKQENK ENDHGHDHHQ KQPAQESLFG NQTIENIEKL  240
ENKALTFCFG STSGGCKDIV NGGFSHLAID THTALGSFSQ SFISPTTPDS NYFTPSPCQR  300
SNIGGTHNMQ PLESDVHEIF SANTSATNSP ILDWDFPFDS EQINSNFPFN SPGFFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	110	PRKESKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	7e-61	WRKY family protein