PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023547050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 25902.1 Da PI: 9.1876 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.9 | 1.6e-12 | 63 | 114 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+++P++ + ++ + a+i+ +++ +++L+ XP_023547050.1 63 QRMTHIAVERNRRKQMNEYLCVLRSMMPSS---YTQRGDQASIVGGTIKLVRELE 114 79****************************...9***************999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MVLGLESAVF QEDKLIGCGW KNVEAMEAGE FVGGGLRATV APVGKRWGRR GKMVKKREEI 60 EKQRMTHIAV ERNRRKQMNE YLCVLRSMMP SSYTQRGDQA SIVGGTIKLV RELEQLVQWL 120 EGKKQRHEHI CYAGQDYSGE SKVEVRVIES YANIKMRAEN RPNQLLKVAL ELHSLKLLIL 180 HVNVTTIGQM VFYCFSVKIE DGCELSTVGE ITAAVNQMFQ RILTEKGD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 75 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 4e-52 | bHLH family protein |