PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CPP | ||||||||
Protein Properties | Length: 241aa MW: 26589.4 Da PI: 8.767 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 52.3 | 1.1e-16 | 126 | 165 | 2 | 41 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + k+C+C+kskClk+YC+Cfaag +Cse+C+C++C+Nk + XP_023546357.1 126 DAKRCSCTKSKCLKLYCDCFAAGMYCSENCSCQGCFNKPK 165 5799*********************************987 PP | |||||||
2 | TCR | 24.9 | 4.1e-08 | 212 | 233 | 1 | 22 |
TCR 1 kekkgCnCkkskClkkYCeCfa 22 ++kkgC+C ks C k+YCeCf+ XP_023546357.1 212 RHKKGCKCIKSMCSKQYCECFQ 233 589******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MNFEATFNNR VPAAANSSHL VRTPLRPTSV GNPLLQAPKP SGIGLHPNSV ILEACNAVVG 60 RTNKAISLPN SFILEPCNAA VKAETSETPH DTRDSDFNQS PNLEKISKVI PRRKRKKSSV 120 NNNGDDAKRC SCTKSKCLKL YCDCFAAGMY CSENCSCQGC FNKPKNLRTV LETRHQIETR 180 DPLAFAPTVI EDRNEIPVNN ENGSLSTPSL ARHKKGCKCI KSMCSKQYCE CFQVYYPSLC 240 N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 117 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 2e-43 | CPP family protein |