PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546246.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 240aa    MW: 26378.1 Da    PI: 6.3873
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1024e-3252107359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++rYkeClkNhA+ +Gg+avDGCgEf+p+ geeg+++alkCaAC+CHRnFHR+e+++
  XP_023546246.1  52 NIRYKECLKNHAIGIGGQAVDGCGEFLPA-GEEGSIDALKCAACNCHRNFHRKETDS 107
                     689*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDLDEEHDDQ DDEVIEEMPI AHHFDATPPP PGEGSSAARK TGGGGGGIGG GNIRYKECLK  60
NHAIGIGGQA VDGCGEFLPA GEEGSIDALK CAACNCHRNF HRKETDSDQG HYYNLHQHHQ  120
FSYRGPPHPS AYVYLTGAPI QQRPLALPAA VSGREEEDNT SNPSSSGGGT GLLKKRFRTK  180
FSQEQKEKML EFAEKVGWTI QKHDEADVEE FCRTTGVRRQ VLKVWMHNNK HTLGKKCSND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-64ZF-HD family protein