PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545900.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 336aa    MW: 35793.7 Da    PI: 6.8954
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.61.1e-31102157359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +vrY+eClkNhAas+Gg+ +DGCgEfmps ge+gt +alkCaAC+CHRnFHR+e + 
  XP_023545900.1 102 GVRYRECLKNHAASVGGNIYDGCGEFMPS-GEDGTLEALKCAACECHRNFHRKEIHG 157
                     79**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDIREQEKEV IIPAASAGGG YAHIFGETSS GGVVDRRLES IHNGSHHHIQ TDLHDADCVA  60
ATTENIGNGG GGSGGVSGGG GGGGGGSFSS GGRSKARGAG SGVRYRECLK NHAASVGGNI  120
YDGCGEFMPS GEDGTLEALK CAACECHRNF HRKEIHGESQ LNISPNYRRG LMLNHLQLPA  180
PLPSPSALHG HHKFSMALNL HSSPNAPIIA PMNVAYGGGG GTESSSEDLN VFHSNAEVMP  240
PSSFSLKKRY RTKFTQEQKD RMLEFAERVG WRIQKQDEED VERFCSDVGV KRQVLKVWMH  300
NNKNTVKKPN ENHEPEPAAV AVAVDVGTCT VVTSES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.14e-67ZF-HD family protein