PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023545717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 252aa MW: 28734.2 Da PI: 9.9667 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.1 | 4.6e-21 | 118 | 177 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+ + r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_023545717.1 118 TRWNPTQEQIGILEMLYSRgMRTPNAQQIEHITAQLgnygKIEGKNVFYWFQNHKARERQ 177 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 116.2 | 1.6e-37 | 118 | 179 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_023545717.1 118 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQ 179 8***********************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MPFFTMGSSM KVHQFARGFW DEPSLSLGCK RLRPLAPKLQ QHQQQHQQQH QQQHPSSSSS 60 SDHNTTTTTL TTLDLKTFIR PDCGPRKLGS SHDHNKGSSS SSSSSSPQTA VETHPGGTRW 120 NPTQEQIGIL EMLYSRGMRT PNAQQIEHIT AQLGNYGKIE GKNVFYWFQN HKARERQKQK 180 RNSLGLPHSP RTPPPPILPT FHPSFPGEED SPYKKKCLYW GFECFVQHNG ILCKKEDGDR 240 TLDLFPLHPE RR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G46480.1 | 1e-59 | WOX family protein |