PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545044.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 262aa    MW: 29482.1 Da    PI: 10.717
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.1e-0981131353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_023545044.1  81 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 131
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MSNLHYPVTG ALQLSFESLS SINMESLHDR ASSGQVMQSI QSYPTSGTMH QMYPQGQPLM  60
IKHYSPISSF PRKENTLHAA QKHRLAEQSR RNRISGQYDT LRAILPSIYK TDMSKLKKAF  120
VLSETIRMVK EFKKLVSEKR ATNREVGDCG IPSGADRLSL EHCDGGEGMV KAVMSCEDRP  180
NIMAELAKAL KTVKVKLVRA EMVTMGGRNK FALWMQGPKE GPGVLKRVLE AVMRRPSWIA  240
RKHRSSWHSR ASTAYNFNRA TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.15e-23bHLH family protein