PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Trihelix | ||||||||
Protein Properties | Length: 249aa MW: 30338.8 Da PI: 10.3764 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 72.6 | 6.7e-23 | 33 | 114 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+ e+++L+++r +++r+++ k++ lW +v+ km+++gf+r+ +qCk+kw+nl +ryk +++++ k + +++p++d+l+ XP_023544953.1 33 WSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA--LK-QQFPFYDDLH 114 ********************************************************************95..44.479****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MEDCDRRAFL HRRTNRIGVN AEAAAAADRF PAWSVPETKE LLAIRAALDR RFSEMKQNRM 60 LWISVAGKMK AKGFNRNDEQ CKCKWKNLVT RYKGCETMDP KALKQQFPFY DDLHTIFTAR 120 MQKNWWIEPE NRAKDSKRKA MTERLSSEDP KRGKRRREED ERSNLKEIMK GFVEREKEME 180 RQWREAFRVR EEERRLKEKE WRMKMEGLER EKMMTWIMWR EKDDERRERE EARALNTHAF 240 IYALLSSFT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 137 | 157 | KRKAMTERLSSEDPKRGKRRR |
2 | 150 | 156 | PKRGKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 5e-42 | Trihelix family protein |