PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544940.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 306aa    MW: 34652.3 Da    PI: 6.6301
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.83.6e-56111381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdee+v++yL++k+++  +++ ++i e+d++k+ePwdLp+k+k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+l+ 
  XP_023544940.1  11 LPPGFRFHPTDEEIVTYYLTHKITDAAFTA-TAIGEADLNKCEPWDLPHKAKMGEKEWYFFCQRDRKYPTGMRTNRATQTGYWKATGKDKEILKG 104
                     79*************************999.88***************99999*****************************************9 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ l g+kktLvfykgrap+gekt+Wvmhe+rle
  XP_023544940.1 105 RTVLAGMKKTLVFYKGRAPRGEKTNWVMHEFRLE 138
                     9999***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEEPPPTALD LPPGFRFHPT DEEIVTYYLT HKITDAAFTA TAIGEADLNK CEPWDLPHKA  60
KMGEKEWYFF CQRDRKYPTG MRTNRATQTG YWKATGKDKE ILKGRTVLAG MKKTLVFYKG  120
RAPRGEKTNW VMHEFRLEPK FFQFLGFPKP IKADWVVCRV FHKNTTTTIG VVKKIQTSEF  180
SSSLPPLIDP AAARTPISGG FNNGEVNWRL SGPFDNYTND YHYHQPFSVA SAAPTTISIM  240
NSYPPSVPDD EFFSFDQLGV GGTMPMTTTT TMECKMEQVS WSTMSGVTPE ISSSIDNEAA  300
LEFWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.23e-94NAC family protein