PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544491.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 356aa    MW: 39465 Da    PI: 6.0325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.3e-052562881754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_023544491.1 256 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 288
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MAEDFQAAIC GDNWWSSSRT MLVAVGGLSP CSMGIGDLAW PPADDFSDIK PKSTANYSDN  60
QNSMFFQDYS TSDHWNQPHD FLLKRGDYLL EQNGVNCMNC SSTSQGLFPL DSGLYGYPSP  120
STKLLHGLYN NDDDDDHHHH PDPHSLFNAA TTSINTNYPS NYLIKPSLPI PPPSQPVSPA  180
LHFTNNTPFW NASHAPPSIE IPQNCRLGFK AMNNGNCEDG EEARKGDKNE PPVLKRPRIE  240
TPSPLPTFKV RKEKLGDRVT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QLLSTPYMKN  300
NNGITPIQHQ QVSEKADPKQ DLKSRGLCLV PISSTFPVTN ATTADFWSPT FGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.15e-54bHLH family protein