PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544166.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 327aa MW: 36060.1 Da PI: 7.3682

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.3	8.2e-34	49	103	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_023544166.1 49 KQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103 79****************************************************8 PP
2	Myb_DNA-binding	60.6	3.4e-19	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++e++v+av+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_023544166.1 51 RLRWTHDLHERFVNAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 102 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MFQQQSTHNS SFLQNNSLVR DQNIPFDASS MEPTNGSNDP SNTPNLASKQ RLRWTHDLHE 60 RFVNAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDGKKADKK 120 DSIDVLSNIE GSSGMQITEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ 180 KLSGVLSGAA PVASSFSAPA SGENCPETDK NDPPTPAPTS EFPRQEKASK ERAQAKSVSI 240 DDSFSSRHEP LTPDSGCHSS PNESPKPVKK QRQYQDGAFA KSEMILAHQI LESSLNSTHK 300 GSRSVFPARE TLDPSSGLSI GDDEQFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-93	G2-like family protein