PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 259aa MW: 28587.8 Da PI: 9.1792 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 193 | 215 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C+ Fs s+L+ H ++ H XP_023544085.1 193 QCPQCSAKFSLVSSLVEHVKKvH 215 7*******************999 PP | |||||||
2 | zf-C2H2 | 15 | 7.3e-05 | 232 | 253 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+C++ F ++ L+ Hi + H XP_023544085.1 232 CPKCSRGFIDPVALVEHIEKdH 253 ******************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MLTVRIFSPW LSFQAKIWVS VFCLEHRSYN RHSCPKADRR DVTVVICPLC AKGVRLVPDQ 60 DPNITWEIHV NTECDPSNYE KVTKKKKCPV PGCRESLTFS NTIKCRDCSV DHCLKHRFGL 120 DHKCPGPKKP EPAGFPFVGV LSRSKQEENG PKKALPNTAS SNWTTALLNV ASSFKASWKA 180 TGNNSNGNGH VEQCPQCSAK FSLVSSLVEH VKKVHESGVN RPGAKKVVID ACPKCSRGFI 240 DPVALVEHIE KDHGGTSKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41835.1 | 1e-101 | C2H2 family protein |