PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544001.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 286aa MW: 32243.4 Da PI: 6.9552

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.7	5.4e-20	25	86	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+++ r psa+++++++++l +++ ++V++WFqN++a+e++ XP_023544001.1 25 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 86 58**************98678***********************************97 PP
2	Wus_type_Homeobox	114.5	5.2e-37	24	88	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023544001.1 24 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 88 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MEPKQGNEEG SNGKGQAGFL CRQSSTRWTP TTDQIRILKE LYYNNGVRSP SADQIQRISA 60 RLRQYGKIEG KNVFYWFQNH KARERQKKRF TSGSDHHLSK QQQQQHPSLI PSTLWKPQDS 120 SSSFHNRYRP SKEYVSIAPS SPVMVAVGHM GNYGYGSSTF DNSFRECSIL SGGSSSVIGS 180 RSHNMGSWIG VDRRSSPAAD IFEKTKYVEE YMEDEEEEQE IETLPLFPIH GGDRNLSGFC 240 SMRQEYSDSF YTTTWYGSSD DGAAGSRTSL ELSLNSYATI SPDDGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	9e-42	WOX family protein