PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 201aa MW: 23291.3 Da PI: 6.6359 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 97.2 | 1.7e-30 | 16 | 132 | 2 | 102 |
HHHHHHHHHCTG.........................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBT CS HSF_DNA-bind 2 Flkklyeilede.........................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekk 71 Fl+k+y++l+++ ++++sw+++g+ f+v+ + +f++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++ XP_023543806.1 16 FLSKTYDLLQEAgsfhfkaadeedeedeedeeaeengGGNRIVSWNADGSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKR-- 108 77788888875555555555555556666666666667899************************************************9998.. PP TTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 72 skskekiweFkhksFkkgkkellekikrkks 102 weFkh++F++g++++l +i rkk XP_023543806.1 109 -------WEFKHEKFQRGNRHMLVEIVRKKC 132 .......*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MSLVMQSSRI RNPAPFLSKT YDLLQEAGSF HFKAADEEDE EDEEDEEAEE NGGGNRIVSW 60 NADGSGFIVW SPADFSEVLL PKYFKHNNFS SFIRQLNTYG FKKTSPKRWE FKHEKFQRGN 120 RHMLVEIVRK KCEPSVFPAF LRSSHEGAAT MGVDQENGDH LLLMEENKNL RRQKLELQAQ 180 IAQFKALHIR LLDCVGRRIE K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 9e-39 | HSF family protein |