PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543697.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 208aa MW: 22253.9 Da PI: 7.1808 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113 | 4.2e-35 | 55 | 131 | 6 | 66 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................s 66 +++ ++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt s XP_023543697.1 55 SSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTgtvpaapistispamaS 131 5789********************************************************44444443322222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGSEIALHKF PSSSDHHSQP TAASHSVVRS NASPTNVTQQ SVVPRKSTAS LSSSSSSRDR 60 HTKVNGRGRR VRMPALCAAR IFQLTRELGH RSDGETIEWL LRQAEPSIIA ATGTGTVPAA 120 PISTISPAMA SSGPSVSCRV QSVGVAADEQ GMFAMPPPSC RLDLCQPVGL DYSAAGNDYR 180 HMPFTALLLQ PSTADEAEER QEEEVFRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 3e-38 | TCP family protein |