PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542944.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 356aa    MW: 39512.9 Da    PI: 6.6794
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.6e-28123184159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK + g+++pr+YYrCt +   gC ++k+v+rs++dp++++itY+g+H+++
  XP_023542944.1 123 LDDGFSWRKYGQKGIFGAKHPRGYYRCTRRnlqGCVATKQVQRSDDDPTIFKITYRGNHTCS 184
                     59**************************998889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MENLGEWERK NLQNELLKGK EFARQLRVHL NVRPSTSSMA AAASSSSSYD GVELLVQKIL  60
SSYEKALSLL SSTKSPSSLN ANPRSEDSDH IAQTNAASRK RNILPTWTLK FQVTPGMALE  120
GSLDDGFSWR KYGQKGIFGA KHPRGYYRCT RRNLQGCVAT KQVQRSDDDP TIFKITYRGN  180
HTCSQVSNLG TTPAAPEFQQ QNRRIDQNLV QSQQTSPDAL LNSWASLRII TENLDTVHEP  240
ILFPPFSYDP TSSYEAADRI ESTSTVDMNF TEFSPSFLSP TKCGSGVSYF SGSSSEMSEG  300
FIGNQKLESQ PRKSELPEIF SSPTSGVNSR TLGLDFPSGE LQMEPSFTFD NTTFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.16e-44WRKY family protein