PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542025.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Nin-like
Protein Properties Length: 276aa    MW: 32084.2 Da    PI: 7.9741
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.66.7e-25167214552
          RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     + le+++k+F+ pi++AAk ++v+lTvLKr+CR++ I+RWPhRk+ksl
  XP_023542025.1 167 LGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSL 214
                     789*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MKRSSSVKPE IQGAFWLKGP PSLLEAAKVG KFECEKSPIL ALPPHHCVSW LPLALELPPL  60
DVDGSFDFNS LSLPFHWDDI SELEAEILSL DKHMIPVTPL YEEHMVADET KPERMVKLKD  120
DDMSRELQEV TRMIETGLSS CKEEEEEEYE RRVRLIMRNG RRTNSVLGLE EIQKHFHIPI  180
TEAAKAMNVG LTVLKRRCRE LHIMRWPHRK LKSLNSLITN VQEMGLTNEI KGLEEHKRLV  240
EELPDMDLTH RTRRLRQACF KANYKKKRRS NVAARH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265269KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.14e-40Nin-like family protein