PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541248.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 357aa MW: 38002.2 Da PI: 9.1414

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.4	3.5e-40	55	162	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_023541248.1 55 PPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISAPshfrtsy 149 789******************************************************************99987777777777444444455555 PP TCP 89 ............k 89 + XP_023541248.1 150 fnptqfavrtrsD 162 5555555544330 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MIMDAENGIR RPNFPLQLLE KKEEHHPCST SANNGTSTTT PILQSSSSSS PNKPPPKRAT 60 TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT 120 IPANFTSLNI SLRSSGSTIS APSHFRTSYF NPTQFAVRTR SDLWDRSNAL VDDSSTFLNF 180 NSSNYVKHDQ GGIDLTEAGK KRRPEQSESS SENPIGNYLV QSNSGSIPAS HGTAVPTTFW 240 MMTNPSNPAS DPMWTFPSMS SSSMFRGAAA ASGSGGFHFM NLPPPMALLP TAQPLGSGIG 300 GSGGGPATDT HLGMLAALSA YRTMPGLSVS ESPTRGVAAV HQSGNEAHDS TSNRDQS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MIMDAENGIR RPNFPLQLLE KKEEHHPCST SANNGTSTTT PILQSSSSSS PNKPPPKRAT  60
TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT  120
IPANFTSLNI SLRSSGSTIS APSHFRTSYF NPTQFAVRTR SDLWDRSNAL VDDSSTFLNF  180
NSSNYVKHDQ GGIDLTEAGK KRRPEQSESS SENPIGNYLV QSNSGSIPAS HGTAVPTTFW  240
MMTNPSNPAS DPMWTFPSMS SSSMFRGAAA ASGSGGFHFM NLPPPMALLP TAQPLGSGIG  300
GSGGGPATDT HLGMLAALSA YRTMPGLSVS ESPTRGVAAV HQSGNEAHDS TSNRDQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-51	TCP family protein