PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541174.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 296aa MW: 33210.1 Da PI: 8.0556

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.9	1.3e-21	70	129	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql+ Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_023541174.1 70 SRWNPTPEQLRLLEELYRRgTRTPSADQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 129 7***************99************************************97 PP
2	Wus_type_Homeobox	116.5	1.2e-37	69	131	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ+++Leely++G+rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_023541174.1 69 SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 131 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MNMWMMGYND GGDLNFSSDS FNARKLRPLI PRPLSSPSTN DFFSQFYQXR TDQSKRELNN 60 APPPPVVVSS RWNPTPEQLR LLEELYRRGT RTPSADQIQH ITAQLRRFGK IEGKNVFYWF 120 QNHKARERQK RRRQMESSDQ SICDIEILER KDSGSGRTVY EVEHTKNWPT STNCRTLVEE 180 SLPIQRAPKD CTKTQNGCLH STAATPGGVG GGGVGGCRQL MMNTAPMAAT TTTATVTTIM 240 HQDDGVEGLE ESETLQLFPL CSETRNGGCE TVGSSGMNSA NVMTPLQFFE FLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-38	WOX family protein