PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540775.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 159aa    MW: 17656.5 Da    PI: 10.2643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ah ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_023540775.1  2 AHIAVERNRRRQMNEHLRVLRTLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    8*************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MAHIAVERNR RRQMNEHLRV LRTLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESNK  60
RRRKSVSPSP SPRPLVAVAD GFENGVDVGA CCNSSVADVE AKISGSNVLL KIISRRIPGQ  120
LSKMISVLER LSFEVLHLNI SSMDDTVLYS FVVKGLNVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-65bHLH family protein