PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540763.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 289aa    MW: 31747.7 Da    PI: 8.6772
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.6e-18211245135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C++  Tp+WR gp g+ktLCnaCG++y+k g+
  XP_023540763.1 211 CSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGR 245
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDYQPKMVSV NSEYEQDDCS KLKSELSSTL DDDLCSLQMT TMEVDVNLEW LSAFVEECLS  60
AKGSSLPLPP PQLSTHLNNP PPPPNSLSHP TPSSSDSPFS HFSAVPSKAR SKRRQAPANT  120
SIRPLIGQHH LDQLNLLPSK QSLQLTSSSA DTLLLQQTYW LADSELLLPH KAQGGGGEER  180
EKKVDMDQRD TTVKKSLGLQ QKQGAGSGRR CSHCQAQRTP QWRGGPLGPK TLCNACGVRY  240
KKSGRLVPEY RPANSPTFVS FLHSNSHKRV MEMRMINASS STSTAFSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.15e-35GATA family protein