PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023539564.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 332aa MW: 37426.2 Da PI: 4.4225

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023539564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92	4.5e-29	113	174	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dgy+WrKYGqK+++g++fpr YYrCt++ gC ++k+v++s++dp+++e+tY+g+H+++ XP_023539564.1 113 LNDGYSWRKYGQKDIHGANFPRCYYRCTHRnvrGCLATKQVQKSDNDPNIFEVTYRGRHTCN 174 58*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEHKSLITEL TQGKEMAIQL KTHLPSPPPP GSSPQALIFL TEMIQSSFEN ALLLLNWNPK 60 DPSEEEEEEE EEEPTKNKRK NSTRDVLLKR RKLLPKWTEE VKVSSGSAAE SPLNDGYSWR 120 KYGQKDIHGA NFPRCYYRCT HRNVRGCLAT KQVQKSDNDP NIFEVTYRGR HTCNQSANLG 180 LISVSNRDEI PEETHQNQQN PNSEIIFNFG DQQHFGLKTE DFDNVFPPFS FGSETVDENV 240 FLESMMEPGF VADGNWSAAA VSSATSETAW DFSGYGGEIQ GVQSSEQSNM TEMVSATTSV 300 TNSPIGNGDW DLSLDKVDFD QFFHFDCLDF IS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	92	KRKNSTRDVLLKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	7e-41	WRKY family protein