PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 333aa MW: 36551.4 Da PI: 5.2371 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.6 | 1.6e-30 | 159 | 217 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp ++++tY+ eHnh+ XP_023539257.1 159 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 217 79*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MEMEVDWDLH AVVRGYSAMT SAAASSSAVS SAAVPSSDSY SVSSNSNNSV SMAFGRDQTN 60 RMLSLQDPFD GSNCNSTEEL QEFFNPFLPK SQRSPPLPPP PAPPLLSSPA VKILTHQKQL 120 QNTHLPKQLH STSVSAPRSK RRKNQLKKVC QVPAEALSSD IWAWRKYGQK PIKGSPYPRG 180 YYRCSSSKGC MARKQVERNR SDPGMFIVTY TAEHNHPAPT HRNSLAGSTR QKANTPTPTD 240 AGSEKPDAKH LVCSSEDLST ITESKEEEKE ESLAEDEEDN DLGISDLIVN DDFYVGFEEL 300 DSPNADDCFS DDFPASFGLP WLFNNAPTAT SSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 1e-71 | WRKY family protein |