PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023539156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | YABBY | ||||||||
Protein Properties | Length: 192aa MW: 21203.1 Da PI: 8.406 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 205.6 | 1.8e-63 | 14 | 175 | 6 | 168 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslk.eelleelkveeenlksnvekeesastsvsse 99 ss+++Cyv+Cn C+t+lavsvP +slfk+v vrCGhC++ll vn++ ll++ +h++++ + +++ e ++ + n +++++ + XP_023539156.1 14 SSDHLCYVHCNICDTVLAVSVPCASLFKTVIVRCGHCANLLPVNMRGG-MLLPSPNHFHHTAFfSPNAHNFLEEISDPNPNFVMNQT---DGIDL 104 79****************************************998875.67899999988754133344444444444444443333...33333 PP YABBY 100 klsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn.WahfPkihf 168 + + ++vpr+pp +++P ek+qrvPsaynrfikeeiqrika+nPdishreafsaaakn WahfP+ih+ XP_023539156.1 105 VMATRVGNNVPRPPPsINKPAEKKQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAAAKNqWAHFPHIHN 175 457788899***99989*******************************************99********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MSSFSLPTTP PPPSSDHLCY VHCNICDTVL AVSVPCASLF KTVIVRCGHC ANLLPVNMRG 60 GMLLPSPNHF HHTAFFSPNA HNFLEEISDP NPNFVMNQTD GIDLVMATRV GNNVPRPPPS 120 INKPAEKKQR VPSAYNRFIK EEIQRIKAAN PDISHREAFS AAAKNQWAHF PHIHNFGVPP 180 PNNNTNNTNN TP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 1e-54 | YABBY family protein |