PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538849.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 29023.4 Da PI: 5.7435 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 7.9e-20 | 81 | 130 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrd + r +r++lg+++t+eeAa +++a+ +l+g XP_023538849.1 81 KFRGVRRRP-WGKWAAEIRDpF-----RrTRVWLGTYDTPEEAAVVYDQAAVRLKG 130 89*******.**********66.....45************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGRVCSGGIR FREIRTTTHK PATETKLVRI SFTDGDATDS SSGEDEEPIS IRHVKRHVTE 60 IRLLTRSSKK SPPKSGAEPR KFRGVRRRPW GKWAAEIRDP FRRTRVWLGT YDTPEEAAVV 120 YDQAAVRLKG PNALTNFAEA PISESTVATL LTPPPPAAAA SDSEESRSLC SPTSVLRLEE 180 QIWRPIEHVS EESALEMELN WLYDRNSNSL LFNSRTPQPI NSDEMGDFGD IPMDFESCKW 240 DVENYFQDPT FSISLTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-40 | ERF family protein |