PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538246.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 286aa    MW: 32121.3 Da    PI: 7.9647
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538246.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.8e-51161441128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lppGfrFhPtdeel+v+yL+ k+ + ++    v i+evd++++ePw+Lp ++k +ekewyfFs r +ky+tg r+nrat +gyWkatgkd++++s
  XP_023538246.1  16 LPPGFRFHPTDEELIVYYLASKTFQASNFH-GVsIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHS 109
                     79********************98888444.445***************989999***************************************9 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g + g+kktLvfykg ap+g kt+Wvmheyrl
  XP_023538246.1 110 DsNGVKLGTKKTLVFYKGGAPRGLKTKWVMHEYRL 144
                     878889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MFGIEEADNG KDKHGLPPGF RFHPTDEELI VYYLASKTFQ ASNFHGVSIA EVDLNRCEPW  60
ELPDEAKMGE KEWYFFSLRV RKYPTGLRTN RATVAGYWKA TGKDRQIHSD SNGVKLGTKK  120
TLVFYKGGAP RGLKTKWVMH EYRLHSDLAS RNACKDEWVL CRIIHKSGEK IKPRRCLQAS  180
PLSVPSPVSL PPLFLDEAQT IAHDNLRLQA ALQNLQRHEN GVESFITNNP HFIFQSTLLP  240
FGLNVDTHLS PPSLQGTTSS TDTHLVDVGG YAGGRGECDE NWSGGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.14e-82NAC family protein